--- man/Stemwardness.Rd.orig 2024-11-04 17:31:05.000000000 +0800 +++ man/Stemwardness.Rd 2026-02-06 19:34:39.000000000 +0800 @@ -54,17 +54,6 @@ falls within the clade \emph{(a, b)}, so should be considered more "crownwards", yet has a smaller root-node distance (3). -\insertFig{Stemwardness.png}{TreeTools}{ -par(mfrow = c(1, 2), mar = rep(0.3, 4)) -plot(ape::read.tree(text="(.,(.,(.,(.,(X1,(a,b))))));")) -ape::nodelabels(1:4, 9:12) -ape::edgelabels(1:2, 11:12) - -plot(ape::read.tree(text="(.,((.,(.,.)),(b,(X2,a))));")) -ape::nodelabels(1:3, c(9, 12, 13)) -ape::edgelabels(1, 12) -} - \code{SisterSize()} measures the number of leaves in the clade that is sister to the chosen leaf, as proposed by \insertCite{Asher2020;textual}{TreeTools}. In the examples above, \emph{X1} has a sister size of 2 leaves, whereas \emph{X2},